EstroGeneDB supports analysis regarding to 3 types of data: MicroArray, RNA-seq, and Chip-seq Data. Click the SEARCH button on the top bar to enter the search page.
Enter the gene of interest into the search box, hit the search button on the right to start automatic query in our precomputed database.
Chip-Seq data analysis is also provided in the form of TSS binding sites against its peak calling scores. The dot plot represents the combination of all ER binding sites at the -/+ 200 kb regions around the TSS of the GOF (from either CSS+E2 or full medium groups). Cell lines and conditions are specified. The green histogram summarizes the number of ER binding sites within each 10kb region. We also provided the binding sites quantification of each data set shown as a box plot.